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RASA4::RASA4B

High support

Canonical-transcript structure of the two partner genes, and the read-level evidence supporting the fusion in each tumor sample.

Known studies

No published studies in the Mitelman database describe the RASA4::RASA4B gene fusion. It may be novel, private to this case, or a technical artifact — absence from a curated database is not by itself evidence either way.

Canonical transcripts in genomic order spliced together in the fusion mRNA 61.9 kb apart chr7 RASA4B (-) ENST00000465829 · Ensembl canonical 102,506,795 breakpoint 102,479,976 102,517,777 21 exons · 37.8 kb chr7 RASA4 (-) ENST00000262940 · Ensembl canonical 102,605,959 breakpoint 102,579,646 102,616,756 21 exons · 37.1 kb
Canonical transcripts shown in genomic order on chr7 (lower-coordinate gene on the left). Each gene is drawn at its own zoom level. Introns are compressed to 1% of their genomic length so the exons are easier to see — the pixel-space x-axis is therefore non-linear, but the labelled start and end coordinates of each transcript are exact. The gap shown between the two panels (when on the same chromosome) is the actual distance between gene bodies. Transcript IDs are MANE Select where available, else Ensembl_canonical, else the longest protein-coding transcript.

Left hand (primary)

Reportable 46 fragments (46 split, 0 discordant) · RASA4 exon 5 → RASA4B exon 5
All 8 candidate breakpoints in this sample
Breakpoint (up)Breakpoint (down)TypeJunction TotalSplit RealignedDiscordant
chr7:102,605,959 chr7:102,506,795 DEL CANONICAL/CANONICAL 46 46 0 0
chr7:102,599,860 chr7:102,501,227 DEL KNOWN/KNOWN 15 5 0 10
chr7:102,608,761 chr7:102,511,981 DEL KNOWN/KNOWN 6 2 0 4
chr7:102,599,859 chr7:102,501,110 DEL UNKNOWN/UNKNOWN 5 1 0 4
chr7:102,594,467 chr7:102,500,793 DEL CANONICAL/KNOWN 5 1 0 4
chr7:102,595,305 chr7:102,496,964 DEL KNOWN/KNOWN 4 1 0 3
chr7:102,593,766 chr7:102,494,897 DEL UNKNOWN/UNKNOWN 3 1 0 2
chr7:102,609,358 chr7:102,510,312 DEL UNKNOWN/UNKNOWN 2 1 0 1

Lung metastasis

Reportable 11 fragments (11 split, 0 discordant) · RASA4 exon 4 → RASA4B exon 5

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