Canonical-transcript structure of the two partner genes, and the read-level evidence
supporting the fusion in each tumor sample.
Known studies
No published studies in the Mitelman database describe the
SFTPC::SFTPA1 gene fusion. It may be novel, private to this case, or a technical artifact — absence from a curated
database is not by itself evidence either way.
Canonical transcripts shown in genomic order
— SFTPC on chr8, SFTPA1 on chr10. Each gene is drawn at its own zoom level. Introns are compressed
to 1% of their genomic length so the exons are easier to see — the
pixel-space x-axis is therefore non-linear, but the labelled start and
end coordinates of each transcript are exact. The gap shown between
the two panels (when on the same chromosome) is the actual distance
between gene bodies. Transcript IDs are MANE Select where available,
else Ensembl_canonical, else the longest protein-coding transcript.