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SRGAP3::SRGAP3

Known partner

Canonical-transcript structure of the two partner genes, and the read-level evidence supporting the fusion in each tumor sample.

Known studies

No published studies in the Mitelman database describe the SRGAP3::SRGAP3 gene fusion. It may be novel, private to this case, or a technical artifact — absence from a curated database is not by itself evidence either way.

Canonical transcripts in genomic order spliced together in the fusion mRNA 269.1 kb apart chr3 SRGAP3 (-) ENST00000383836 · Ensembl canonical 9,362,840 breakpoint 8,980,591 9,249,646 22 exons · 269.1 kb chr3 SRGAP3 (-) ENST00000383836 · Ensembl canonical 9,350,066 breakpoint 8,980,591 9,249,646 22 exons · 269.1 kb
Canonical transcripts shown in genomic order on chr3 (lower-coordinate gene on the left). Each gene is drawn at its own zoom level. Introns are compressed to 1% of their genomic length so the exons are easier to see — the pixel-space x-axis is therefore non-linear, but the labelled start and end coordinates of each transcript are exact. The gap shown between the two panels (when on the same chromosome) is the actual distance between gene bodies. Transcript IDs are MANE Select where available, else Ensembl_canonical, else the longest protein-coding transcript.

Lung metastasis

Reportable 5 fragments (5 split, 0 discordant)

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